Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946597.1_cds_XP_016488643.1_79256
CDS Infomation

[gene=LOC107808631] [db_xref=GeneID:107808631] [protein=30S ribosomal protein S1, chloroplastic-like] [protein_id=XP_016488643.1] [location=join(70602..70910,71436..71711,71801..71881,73845..74126,74207..74317,74409..74495,75457..75561)] [gbkey=CDS]
Sequence

ATGGCTTCTTTGACACAACAATTCGGAGGGTTGAAATGCCCACCAATTTCAACAGCAAGG
CTTCAATCCAAGAAGCTTAAGGTGAATCCCATTAATCATCAGAATAAGGCTAACAAAGCA
AGAATAGTAGCACAAGCTGCAGCAGTGGTCACAAATGCACAAACAAGAGAAAGACAAAAG
CTTAAGGAGATGTTCGAGGATGCCTATGAGCGATGCCGTACTGCACCTCTGGAAGGTGTT
GCCTTTACTGTTGAAGATTTTCACTCTGCCCTTGAAAAATATGATTTTGACTCCGAAGTT
GGTACCAAGGTCAAAGGAACAGTTTTCTCTGTGGATGCAAATGGAGCTCTAGTTGACATC
ACTGCAAAATCATCTGCATACTTGCCTTTACGAGAGGCTTCACTTCACACCATCAAGCAC
GTAGAGGAAGCCGGAATATATCCTGGTTTGCGTGAGGAGTTTGTGGTGGTTGGCGAAAAT
GAAGCTGATGATAGTTTGGTTTTGAGCTTGCGTTCGATTCAATATGACCTTGCATGGGAA
CGATGTAGGCAGCTACAAGCTGAAGATGTTGTTGTCAAAGGCAAGGTCGTTGGTGCAAAT
AAAGGTGGAGTGGTGGCTCTGGTGGAGGGGCTTCGTGGTTTTGTTCCGTTCTCGCAGATA
TCAACGAAATCAACTGCAGAGGAACTTTTGGAAAAGGAGCTTCCTCTGAAGTTTGTTGAG
GTTGATGAAGAGCAATCCAGACTTGTGCTCAGCAATCGTAAGGCCATGGCTGATAGTCAG
GCACAATTAGGAATAGGCTCAGTCGTTCTTGGAACAGTTCAGAGCTTGAAACCATATGGT
GCCTTCATTGACATTGGTGGGATCAATGGCCTTCTTCATGTGAGTCAGATCAGTCATGAT
CGTGTCTCTGATATTGCAACAGTCCTCCAGCCTGGTGACACTCTCAAGGTCATGATATTG
AGCCATGATCGTGAGAGAGGTCGAGTGAGCCTTTCAACAAAGAAGCTAGAGCCTACACCT
GGTGACATGATTCGCAATCCAAAGCTTGTCTTTGAGAAAGCTGAGGAGATGGCCCAAACA
TTCAGGCAGAGAATTGCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGGTTCCAG
CCTGAGAGTGGATTGACCCTGAACTCTGACGGGATTTTAGGCCCGCTGACCTCTGAACTA
CCCGAGGATGGACTGGATTTGAGTGAGATTCCGCCAGCTGAAGATTTATGA

Peptide Sequence

PEP ID

XP_016488643.1
PEP Infomation

PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASLTQQFGGLKCPPISTARLQSKKLKVNPINHQNKANKARIVAQAAAVVTNAQTRERQK
LKEMFEDAYERCRTAPLEGVAFTVEDFHSALEKYDFDSEVGTKVKGTVFSVDANGALVDI
TAKSSAYLPLREASLHTIKHVEEAGIYPGLREEFVVVGENEADDSLVLSLRSIQYDLAWE
RCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISTKSTAEELLEKELPLKFVE
VDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHD
RVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
FRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLTSELPEDGLDLSEIPPAEDL

Transcript Sequence

Gene sequence data has not been registered.